Gene detail information of Glyur000360s00014633.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G41210.11.00E-86glutathione S-transferase THETA 1
NRAET05003.28.10E-166glutathione S-transferase, amino-terminal domain protein [Medicago truncatula]
COGYP_006218079.16.00E-20glutathione S-transferase [Providencia stuartii MRSN 2154]
Swissprottr|Q9ZRT5|GSTT1_ARATH5.00E-118Glutathione S-transferase T1
trEMBLtr|G7LI06|G7LI06_MEDTR3.00E-166Glutathione S-transferase, amino-terminal domain protein {ECO:0000313|EMBL:AET05003.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00360156071159239+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000360s00014633.1PF02798.15GST_N4775.00E-10
Glyur000360s00014633.1PF13410.1GST_C_21332043.80E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.240
SRR1783600control18.448
SRR1783602moderate drought stress15.042
SRR1811619moderate drought stress14.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.053
DRR006520Root Summer glycyrrhizin high producing strain23.561
DRR006521Root Winter glycyrrhizin high producing strain16.557
DRR006522Root Winter glycyrrhizin high producing strain16.468
DRR006523Root Summer glycyrrhizin low producing strain13.315
DRR006524Root Summer glycyrrhizin low producing strain13.658
DRR006525Leaf Summer glycyrrhizin high producing strain3.444
DRR006526Leaf Summer glycyrrhizin high producing strain3.484

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.957
SRR2868004Drought Stress(Tissue:root)16.024
SRR2967015Control (Tissue:root)21.929

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.518
SRR9715740Leave6.153
SRR9715741Leave9.010
SRR9715739Root6.777
SRR9715742Root12.734
SRR9715743Root13.163

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.649
SRR8749028MeJA induced 9h14.340
SRR8749029MeJA induced 9h21.264
SRR8749030Uninduced16.328
SRR8749031Uninduced15.820
SRR8749032Uninduced19.800

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.152
SRR8400027Control-Root19.445

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved