Gene detail information of Glyur000364s00018054.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50670.11.00E-103OTU-like cysteine protease family protein
NRXP_004491398.11.49E-145PREDICTED: ubiquitin thioesterase OTU1-like isoform X2 [Cicer arietinum]
trEMBLtr|I3T4E6|I3T4E6_LOTJA6.00E-145Uncharacterized protein {ECO:0000313|EMBL:AFK47388.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00364125899129840+


Gene family

Gene familysubfamily
Ubiquitin FamilyOTU


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13719OTU1, YOD1 EC:3.1.2.- Protein processing in endoplasmic reticulum map04141


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000364s00018054.1PF02338.14OTU111203.30E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.669
SRR1783600control12.075
SRR1783602moderate drought stress8.739
SRR1811619moderate drought stress9.394

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.936
DRR006520Root Summer glycyrrhizin high producing strain37.333
DRR006521Root Winter glycyrrhizin high producing strain35.761
DRR006522Root Winter glycyrrhizin high producing strain31.763
DRR006523Root Summer glycyrrhizin low producing strain40.632
DRR006524Root Summer glycyrrhizin low producing strain39.246
DRR006525Leaf Summer glycyrrhizin high producing strain38.668
DRR006526Leaf Summer glycyrrhizin high producing strain36.950

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.938
SRR2868004Drought Stress(Tissue:root)52.403
SRR2967015Control (Tissue:root)50.783

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave50.619
SRR9715740Leave62.655
SRR9715741Leave53.626
SRR9715739Root9.672
SRR9715742Root20.244
SRR9715743Root18.789

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.492
SRR8749028MeJA induced 9h35.383
SRR8749029MeJA induced 9h31.045
SRR8749030Uninduced54.304
SRR8749031Uninduced55.834
SRR8749032Uninduced38.324

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.706
SRR8400027Control-Root47.577