Gene detail information of Glyur000364s00018062.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50670.19.00E-90OTU-like cysteine protease family protein
NRXP_004491398.11.98E-126PREDICTED: ubiquitin thioesterase OTU1-like isoform X2 [Cicer arietinum]
trEMBLtr|I1JJ98|I1JJ98_SOYBN1.00E-127Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G46040.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00364172771176785+


Gene family

Gene familysubfamily
Ubiquitin FamilyOTU


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13719OTU1, YOD1 EC:3.1.2.- Protein processing in endoplasmic reticulum map04141


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000364s00018062.1PF02338.14OTU491445.90E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.012
SRR1783600control17.550
SRR1783602moderate drought stress19.832
SRR1811619moderate drought stress19.085

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.606
DRR006520Root Summer glycyrrhizin high producing strain17.121
DRR006521Root Winter glycyrrhizin high producing strain22.623
DRR006522Root Winter glycyrrhizin high producing strain22.298
DRR006523Root Summer glycyrrhizin low producing strain35.278
DRR006524Root Summer glycyrrhizin low producing strain35.719
DRR006525Leaf Summer glycyrrhizin high producing strain20.465
DRR006526Leaf Summer glycyrrhizin high producing strain21.294

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.287
SRR2868004Drought Stress(Tissue:root)36.823
SRR2967015Control (Tissue:root)26.103

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.534
SRR9715740Leave55.555
SRR9715741Leave33.746
SRR9715739Root9.877
SRR9715742Root10.875
SRR9715743Root10.097

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.207
SRR8749028MeJA induced 9h52.215
SRR8749029MeJA induced 9h33.715
SRR8749030Uninduced130.491
SRR8749031Uninduced79.021
SRR8749032Uninduced66.437

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.593
SRR8400027Control-Root38.122

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved