Gene detail information of Glyur000365s00022126.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06180.1 | 6.00E-43 | myb domain protein 13 |
| NR | KEH17558.1 | 3.02E-106 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|Q7XBH4|MYB4_ORYSJ | 4.00E-47 | Myb-related protein Myb4 |
| trEMBL | tr|A0A072TL12|A0A072TL12_MEDTR | 1.00E-106 | Myb transcription factor {ECO:0000313|EMBL:KEH17558.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00365 | 80528 | 81696 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000365s00022126.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 1.40E-15 |
| Glyur000365s00022126.1 | PF00249.26 | Myb_DNA-binding | 67 | 127 | 2.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.837 |
| SRR1783600 | control | 0.769 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.330 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.311 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.743 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.471 |
| SRR2967015 | Control (Tissue:root) | 5.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.276 |
| SRR9715740 | Leave | 4.945 |
| SRR9715741 | Leave | 17.776 |
| SRR9715739 | Root | 0.482 |
| SRR9715742 | Root | 4.800 |
| SRR9715743 | Root | 5.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.295 |
| SRR8749028 | MeJA induced 9h | 0.041 |
| SRR8749029 | MeJA induced 9h | 0.148 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.186 |
| SRR8749032 | Uninduced | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.795 |
| SRR8400027 | Control-Root | 1.287 |