Gene detail information of Glyur000365s00022132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20530.1 | 8.00E-52 | Protein kinase superfamily protein |
| NR | XP_006595742.1 | 3.38E-69 | PREDICTED: serine/threonine-protein kinase PBS1-like [Glycine max] |
| COG | YP_007162414.1 | 5.00E-09 | serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605] |
| Swissprot | tr|Q9FE20|PBS1_ARATH | 2.00E-49 | Serine/threonine-protein kinase PBS1 |
| trEMBL | tr|K7M4K5|K7M4K5_SOYBN | 1.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G02850.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00365 | 152760 | 153244 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000365s00022132.1 | PF07714.12 | Pkinase_Tyr | 39 | 124 | 5.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.046 |
| SRR1783600 | control | 0.048 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.530 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.267 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.231 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.974 |
| SRR2967015 | Control (Tissue:root) | 2.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.041 |
| SRR9715741 | Leave | 0.471 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.056 |
| SRR8749030 | Uninduced | 0.075 |
| SRR8749031 | Uninduced | 0.087 |
| SRR8749032 | Uninduced | 0.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.151 |
| SRR8400027 | Control-Root | 0.053 |