Gene detail information of Glyur000366s00019221.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05140.1 | 2.00E-55 | Transcription elongation factor (TFIIS) family protein |
| NR | KHN11861.1 | 4.83E-166 | hypothetical protein glysoja_043939 [Glycine soja] |
| Swissprot | tr|Q9FHK9|MD26B_ARATH | 1.00E-75 | Probable mediator of RNA polymerase II transcription subunit 26b |
| trEMBL | tr|I1JFK5|I1JFK5_SOYBN | 2.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G18250.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 99667 | 102802 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | IWS1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000366s00019221.1 | PF08711.6 | Med26 | 146 | 196 | 3.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.013 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.137 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.001 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.005 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.075 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.028 |
| SRR8749032 | Uninduced | 0.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.001 |
| SRR8400027 | Control-Root | 0.002 |