Gene detail information of Glyur000366s00019224.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21650.1 | 2.00E-22 | Homeodomain-like superfamily protein |
| NR | KHN08900.1 | 2.12E-36 | hypothetical protein glysoja_029477 [Glycine soja] |
| Swissprot | tr|Q58FS3|RAD_ANTMA | 3.00E-32 | Transcription factor RADIALIS |
| trEMBL | tr|Q0PJH6|Q0PJH6_SOYBN | 9.00E-37 | MYB transcription factor MYB142 {ECO:0000313|EMBL:ABH02867.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00366 | 115331 | 116322 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000366s00019224.1 | PF00249.26 | Myb_DNA-binding | 8 | 53 | 1.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.361 |
| SRR1811619 | moderate drought stress | 0.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.357 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.255 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.532 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.993 |
| SRR2967015 | Control (Tissue:root) | 0.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 39.483 |
| SRR9715740 | Leave | 19.700 |
| SRR9715741 | Leave | 9.421 |
| SRR9715739 | Root | 0.089 |
| SRR9715742 | Root | 0.005 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.700 |
| SRR8749029 | MeJA induced 9h | 0.460 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.023 |
| SRR8749032 | Uninduced | 0.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.558 |
| SRR8400027 | Control-Root | 3.734 |