Gene detail information of Glyur000366s00019231.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13940.10S-adenosyl-L-homocysteine hydrolase
NRXP_007034216.10S-adenosyl-L-homocysteine hydrolase [Theobroma cacao]
COGYP_003396398.10adenosylhomocysteinase [Conexibacter woesei DSM 14684]
Swissprottr|Q01781|SAHH_PETCR0Adenosylhomocysteinase
trEMBLtr|A0A061ELA5|A0A061ELA5_THECC0Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00366146313148975+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01251E3.3.1.1, ahcY EC:3.3.1.1 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0006730  one-carbon metabolic process


molecular_function

GO:0004013  adenosylhomocysteinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000366s00019231.1PF05221.12AdoHcyase134831.40E-141
Glyur000366s00019231.1PF00670.16AdoHcyase_NAD2404035.10E-84


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control425.032
SRR1783600control432.884
SRR1783602moderate drought stress321.279
SRR1811619moderate drought stress316.598

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain836.490
DRR006520Root Summer glycyrrhizin high producing strain873.496
DRR006521Root Winter glycyrrhizin high producing strain302.380
DRR006522Root Winter glycyrrhizin high producing strain291.502
DRR006523Root Summer glycyrrhizin low producing strain368.997
DRR006524Root Summer glycyrrhizin low producing strain370.246
DRR006525Leaf Summer glycyrrhizin high producing strain582.910
DRR006526Leaf Summer glycyrrhizin high producing strain578.076

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)548.392
SRR2868004Drought Stress(Tissue:root)284.379
SRR2967015Control (Tissue:root)350.902

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave147.375
SRR9715740Leave170.795
SRR9715741Leave198.407
SRR9715739Root491.554
SRR9715742Root572.949
SRR9715743Root573.858

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h369.113
SRR8749028MeJA induced 9h288.611
SRR8749029MeJA induced 9h157.632
SRR8749030Uninduced89.901
SRR8749031Uninduced52.417
SRR8749032Uninduced87.106

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root388.322
SRR8400027Control-Root367.798

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved