Gene detail information of Glyur000366s00019234.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13980.12.00E-128winged-helix DNA-binding transcription factor family protein
NRXP_003524927.10PREDICTED: heat stress transcription factor A-5-like isoform X1 [Glycine max]
Swissprottr|Q94BZ5|HSFA5_ARATH1.00E-165Heat stress transcription factor A-5
trEMBLtr|I1K3S2|I1K3S2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00366152163155447+


Gene family

Gene familysubfamily
Transcription Factors FamilyHSF
EAR motif-containing ProteinsHSF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009408  response to heat


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000366s00019234.2PF00447.12HSF_DNA-bind181081.70E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.840
SRR1783600control10.959
SRR1783602moderate drought stress15.514
SRR1811619moderate drought stress15.472

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.474
DRR006520Root Summer glycyrrhizin high producing strain15.235
DRR006521Root Winter glycyrrhizin high producing strain26.483
DRR006522Root Winter glycyrrhizin high producing strain25.603
DRR006523Root Summer glycyrrhizin low producing strain12.388
DRR006524Root Summer glycyrrhizin low producing strain13.906
DRR006525Leaf Summer glycyrrhizin high producing strain6.880
DRR006526Leaf Summer glycyrrhizin high producing strain7.234

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.746
SRR2868004Drought Stress(Tissue:root)14.679
SRR2967015Control (Tissue:root)15.325

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.208
SRR9715740Leave7.465
SRR9715741Leave10.335
SRR9715739Root3.981
SRR9715742Root8.510
SRR9715743Root6.876

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.155
SRR8749028MeJA induced 9h20.331
SRR8749029MeJA induced 9h19.199
SRR8749030Uninduced27.938
SRR8749031Uninduced43.256
SRR8749032Uninduced27.661

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.802
SRR8400027Control-Root10.836

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved