Gene detail information of Glyur000366s00019236.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23750.21.00E-13cytokinin response factor 2
NRXP_003548602.12.12E-17PREDICTED: ethylene-responsive transcription factor CRF4-like [Glycine max]
Swissprottr|O82503|CRF1_ARATH2.00E-15Ethylene-responsive transcription factor CRF1
trEMBLtr|K7MFU3|K7MFU3_SOYBN8.00E-18Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G08683.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00366159295163636-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000366s00019236.1PF00847.15AP2741163.10E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.852
SRR1783600control1.813
SRR1783602moderate drought stress2.354
SRR1811619moderate drought stress2.955

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.716
DRR006520Root Summer glycyrrhizin high producing strain2.478
DRR006521Root Winter glycyrrhizin high producing strain2.204
DRR006522Root Winter glycyrrhizin high producing strain2.647
DRR006523Root Summer glycyrrhizin low producing strain3.087
DRR006524Root Summer glycyrrhizin low producing strain2.852
DRR006525Leaf Summer glycyrrhizin high producing strain0.674
DRR006526Leaf Summer glycyrrhizin high producing strain0.711

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.275
SRR2868004Drought Stress(Tissue:root)1.328
SRR2967015Control (Tissue:root)1.303

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.606
SRR9715740Leave0.933
SRR9715741Leave0.677
SRR9715739Root0.108
SRR9715742Root0.722
SRR9715743Root0.238

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.170
SRR8749028MeJA induced 9h0.403
SRR8749029MeJA induced 9h0.759
SRR8749030Uninduced0.577
SRR8749031Uninduced1.368
SRR8749032Uninduced0.478

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.498
SRR8400027Control-Root2.859

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved