Gene detail information of Glyur000369s00020550.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G46700.10CDPK-related kinase 3
NRXP_004494853.10PREDICTED: CDPK-related kinase 3-like [Cicer arietinum]
COGYP_007468874.12.00E-25serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9ZUZ2|CAMK3_ARATH0CDPK-related kinase 3
trEMBLtr|G7L528|G7L528_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:AES82806.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003698266289427+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000369s00020550.1PF00069.20Pkinase1423905.80E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.196
SRR1783600control10.318
SRR1783602moderate drought stress9.026
SRR1811619moderate drought stress8.808

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.071
DRR006520Root Summer glycyrrhizin high producing strain9.009
DRR006521Root Winter glycyrrhizin high producing strain10.320
DRR006522Root Winter glycyrrhizin high producing strain9.952
DRR006523Root Summer glycyrrhizin low producing strain14.933
DRR006524Root Summer glycyrrhizin low producing strain14.826
DRR006525Leaf Summer glycyrrhizin high producing strain4.738
DRR006526Leaf Summer glycyrrhizin high producing strain4.926

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.116
SRR2868004Drought Stress(Tissue:root)33.421
SRR2967015Control (Tissue:root)30.026

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.391
SRR9715740Leave10.926
SRR9715741Leave13.519
SRR9715739Root16.033
SRR9715742Root20.804
SRR9715743Root18.085

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.456
SRR8749028MeJA induced 9h15.482
SRR8749029MeJA induced 9h12.342
SRR8749030Uninduced8.485
SRR8749031Uninduced4.568
SRR8749032Uninduced5.944

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.795
SRR8400027Control-Root25.714

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved