Gene detail information of Glyur000370s00022656.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11430.10glycerol-3-phosphate acyltransferase 5
NRAES99401.20glycerol-3-phosphate acyltransferase [Medicago truncatula]
Swissprottr|Q9CAY3|GPAT5_ARATH0Glycerol-3-phosphate acyltransferase 5
trEMBLtr|G7KGS4|G7KGS4_MEDTR0Glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AES99401.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00370820310552+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13508GPAT EC:2.3.1.15 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000370s00022656.1PF01553.16Acyltransferase2793861.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.378
SRR1783600control5.452
SRR1783602moderate drought stress6.799
SRR1811619moderate drought stress7.002

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.416
DRR006520Root Summer glycyrrhizin high producing strain0.357
DRR006521Root Winter glycyrrhizin high producing strain0.061
DRR006522Root Winter glycyrrhizin high producing strain0.059
DRR006523Root Summer glycyrrhizin low producing strain0.182
DRR006524Root Summer glycyrrhizin low producing strain0.246
DRR006525Leaf Summer glycyrrhizin high producing strain2.294
DRR006526Leaf Summer glycyrrhizin high producing strain2.296

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.231
SRR2868004Drought Stress(Tissue:root)20.423
SRR2967015Control (Tissue:root)19.865

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.464
SRR9715740Leave5.690
SRR9715741Leave4.647
SRR9715739Root23.789
SRR9715742Root10.125
SRR9715743Root12.408

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.074
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced3.649
SRR8749031Uninduced11.019
SRR8749032Uninduced3.089

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root56.869
SRR8400027Control-Root59.968

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved