Gene detail

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Gene detail information of Glyur000372s00017112.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G42990.1	2.00E-11	basic region/leucine zipper motif 60
NR	XP_004514723.1	2.93E-112	PREDICTED: bZIP transcription factor 60-like [Cicer arietinum]
Swissprot	tr\|Q9C7S0\|BZI60_ARATH	5.00E-15	bZIP transcription factor 60
trEMBL	tr\|I3SEC9\|I3SEC9_LOTJA	2.00E-112	Uncharacterized protein {ECO:0000313\|EMBL:AFK38621.1}

Sequence

Transcript Sequence

>Glyur000372s00017112.1
CTCCAAGACACAACGCAAACGCAAACTCTTCTAACTTCTTCCTCAACTTCATATAAAACCGCTTCCACCTCCGCTAACCCTTTTTCTTCCAACCATGCCTCCTCACCTTCACTAATCCCATTCATCATCATCTTCTTCAGAATTTCTGGTTCCATGGACNTTCTAGAAGGACAAGGAGAAGGCCCACTGGATTGGGAAGCTTTCTTCGACCACTTACCAGAATTCGAAGTCGATGATTTTCTTCTTCAGGAAGACCCTCCTGCTCCTGTTCCTGGTCCTCTCTCCGTCGCCGANGCTCCCTCGCCGAATCCCGTTCTGTCGGAGATCGAGAACTTGCTGATGGATGACTCCGCCGACGGCGATGTCCTTCCCGGAACGCCGTCGTCGGATTCCGACTACGACAAGCTTCTGGCGGAGATTCTCGTGGAGCCTCGCCCTGATCAATCCGAGGAAGGCTCGACTCCTTCCGACAGAGACAGAGTCGATCCCGATCCACCAACTCCCGAAGAGGCTACCCATGAACCCATATCTAAGACGCAAATAAGGCAGATTAGGAACAGGGTTTCTGCTGTGAGGTCAAGAGAGAGGAAGAAGTTGTATGTGAAAGACCTTGAGATGAAGAGTAGGTATTATGAAGGGGAATGCAGAAGGCTGCAGCATTTGCTCCAATGCTGCTATGCTGAGAACCATGCTTTGCGGCTTTGTTTGCAATCGCGTGCTGCATTTGGTGCCCCCGTGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCACGGGAATCATGTGCCAACTCAGTCTACCCCTGATACTGTGGCTAACAGTGTTACTTCCAAGAGAAAACATGGAACAGAAAGGCCTAAGAGGGGTGGCTCAAAAAGAACCAGAAAGTAAGATCTCTGAGTATTCCCAGACACAGTCATTTGTAAAGAGTAGAAGATGCCGAGCTTCAAGAACGAAGATGAAATTTTTATTTTTTCATGTTCTATAACTACTTCTGAAGTGGGGCCTTTCAGGTGTTCTATTCATTTCTTCCTTCCTTCTTTCTTTTGTTTTGTTTTGTTTTGTTGAGCTTTTAGATAGGGTCGTAATTAAAAAAAGTATGTAAACCGAACAAGTTGGGATGCTGTTGATATGCATCTTCAGCTGCTATGTTCTTTTGACTTATCACAGGACTATAGTATATGCTATGTTCCTCCTATTCGAAACATGGAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00372	81509	84482	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000372s00017112.1	PF00170.16	bZIP_1	177	219	7.60E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	23.508
SRR1783600	control	23.543
SRR1783602	moderate drought stress	22.875
SRR1811619	moderate drought stress	22.927

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	67.042
DRR006520	Root Summer glycyrrhizin high producing strain	66.533
DRR006521	Root Winter glycyrrhizin high producing strain	65.657
DRR006522	Root Winter glycyrrhizin high producing strain	63.449
DRR006523	Root Summer glycyrrhizin low producing strain	79.978
DRR006524	Root Summer glycyrrhizin low producing strain	80.061
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.778
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.642

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	51.075
SRR2868004	Drought Stress(Tissue:root)	65.810
SRR2967015	Control (Tissue:root)	46.653

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	66.155
SRR9715740	Leave	46.724
SRR9715741	Leave	82.423
SRR9715739	Root	19.382
SRR9715742	Root	54.366
SRR9715743	Root	47.949

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	86.724
SRR8749028	MeJA induced 9h	166.856
SRR8749029	MeJA induced 9h	253.085
SRR8749030	Uninduced	62.624
SRR8749031	Uninduced	108.051
SRR8749032	Uninduced	219.628

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	37.036
SRR8400027	Control-Root	38.132