Gene detail information of Glyur000372s00017121.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04670.13.00E-117Enhancer of polycomb-like transcription factor protein
NRXP_007145542.10hypothetical protein PHAVU_007G247300g [Phaseolus vulgaris]
Swissprottr|Q8W486|Y1491_ARATH2.00E-14Uncharacterized protein At1g04910
trEMBLtr|V7BLR9|V7BLR9_PHAVU0Enhancer of polycomb-like protein {ECO:0000256|RuleBase:RU361124}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00372132231137955+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000372s00017121.3PF10250.4O-FucT35772.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.549
SRR1783600control15.352
SRR1783602moderate drought stress15.911
SRR1811619moderate drought stress15.560

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.201
DRR006520Root Summer glycyrrhizin high producing strain21.522
DRR006521Root Winter glycyrrhizin high producing strain21.714
DRR006522Root Winter glycyrrhizin high producing strain21.434
DRR006523Root Summer glycyrrhizin low producing strain22.990
DRR006524Root Summer glycyrrhizin low producing strain21.050
DRR006525Leaf Summer glycyrrhizin high producing strain15.338
DRR006526Leaf Summer glycyrrhizin high producing strain16.885

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.872
SRR2868004Drought Stress(Tissue:root)26.863
SRR2967015Control (Tissue:root)27.712

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.477
SRR9715740Leave21.270
SRR9715741Leave15.369
SRR9715739Root3.373
SRR9715742Root19.636
SRR9715743Root14.698

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.523
SRR8749028MeJA induced 9h26.496
SRR8749029MeJA induced 9h22.690
SRR8749030Uninduced9.329
SRR8749031Uninduced8.304
SRR8749032Uninduced11.009

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.731
SRR8400027Control-Root24.861

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved