Gene detail information of Glyur000373s00018530.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06170.2 | 6.00E-54 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_007163873.1 | 0 | hypothetical protein PHAVU_L009100g [Phaseolus vulgaris] |
| Swissprot | tr|Q8GX46|BH091_ARATH | 2.00E-84 | Transcription factor bHLH91 |
| trEMBL | tr|V7D2D8|V7D2D8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW35868.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00373 | 34762 | 36821 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
| EAR motif-containing Proteins | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000373s00018530.1 | PF00010.21 | HLH | 325 | 371 | 2.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.527 |
| SRR1783600 | control | 8.718 |
| SRR1783602 | moderate drought stress | 12.835 |
| SRR1811619 | moderate drought stress | 12.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.010 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.088 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.984 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.804 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.371 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.813 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.464 |
| SRR2967015 | Control (Tissue:root) | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.333 |
| SRR9715740 | Leave | 12.250 |
| SRR9715741 | Leave | 13.143 |
| SRR9715739 | Root | 0.754 |
| SRR9715742 | Root | 7.370 |
| SRR9715743 | Root | 5.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.092 |
| SRR8749028 | MeJA induced 9h | 0.077 |
| SRR8749029 | MeJA induced 9h | 0.070 |
| SRR8749030 | Uninduced | 0.069 |
| SRR8749031 | Uninduced | 0.044 |
| SRR8749032 | Uninduced | 0.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.502 |
| SRR8400027 | Control-Root | 6.248 |