Gene detail information of Glyur000373s00018538.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48130.1 | 2.00E-90 | 1-cysteine peroxiredoxin 1 |
| NR | XP_003531110.2 | 6.05E-147 | PREDICTED: 1-Cys peroxiredoxin-like [Glycine max] |
| COG | YP_862559.1 | 5.00E-70 | peroxiredoxin [Gramella forsetii KT0803] |
| Swissprot | tr|Q6E2Z6|REHY_MEDTR | 1.00E-146 | 1-Cys peroxiredoxin |
| trEMBL | tr|I1KRJ7|I1KRJ7_SOYBN | 4.00E-147 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G09310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00373 | 90771 | 91787 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11188 | PRDX6 | EC:1.11.1.7 1.11.1.15 3.1.1.- | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000373s00018538.1 | PF00578.16 | AhpC-TSA | 6 | 139 | 2.40E-31 |
| Glyur000373s00018538.1 | PF10417.4 | 1-cysPrx_C | 161 | 200 | 1.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.232 |
| SRR1811619 | moderate drought stress | 0.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.168 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.033 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.187 |
| SRR2967015 | Control (Tissue:root) | 0.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.084 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.003 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.572 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.073 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.158 |
| SRR8400027 | Control-Root | 0.078 |