Gene detail information of Glyur000373s00018546.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G44790.10copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
NRXP_004504659.10PREDICTED: copper-transporting ATPase RAN1-like isoform X1 [Cicer arietinum]
COGYP_003726721.10heavy metal translocating P-type ATPase [Methanohalobium evestigatum Z-7303]
Swissprottr|Q9S7J8|HMA7_ARATH0Copper-transporting ATPase RAN1
trEMBLtr|A0A072V003|A0A072V003_MEDTR0Heavy metal P-type ATPase {ECO:0000313|EMBL:KEH31405.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00373148503154596-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17686copA, ATP7 EC:3.6.3.54 MAPK signaling pathway - plant map04016
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006812  cation transport

GO:0030001  metal ion transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0005507  copper ion binding

GO:0019829  cation-transporting ATPase activity

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000373s00018546.1PF00403.21HMA431031.70E-11
Glyur000373s00018546.1PF00403.21HMA1291893.00E-13
Glyur000373s00018546.1PF00122.15E1-E2_ATPase4006393.70E-49
Glyur000373s00018546.1PF00702.21Hydrolase6448821.70E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.517
SRR1783600control9.584
SRR1783602moderate drought stress7.572
SRR1811619moderate drought stress7.497

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.414
DRR006520Root Summer glycyrrhizin high producing strain26.902
DRR006521Root Winter glycyrrhizin high producing strain9.436
DRR006522Root Winter glycyrrhizin high producing strain9.505
DRR006523Root Summer glycyrrhizin low producing strain44.751
DRR006524Root Summer glycyrrhizin low producing strain44.856
DRR006525Leaf Summer glycyrrhizin high producing strain9.346
DRR006526Leaf Summer glycyrrhizin high producing strain9.232

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)102.145
SRR2868004Drought Stress(Tissue:root)152.363
SRR2967015Control (Tissue:root)150.586

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave38.532
SRR9715740Leave24.602
SRR9715741Leave64.000
SRR9715739Root43.336
SRR9715742Root154.936
SRR9715743Root133.955

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h72.312
SRR8749028MeJA induced 9h70.849
SRR8749029MeJA induced 9h83.372
SRR8749030Uninduced157.676
SRR8749031Uninduced134.684
SRR8749032Uninduced81.748

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root66.364
SRR8400027Control-Root71.601

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved