Gene detail information of Glyur000374s00017936.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05260.18.00E-95Peroxidase superfamily protein
NRKEH29649.16.65E-177peroxidase family protein [Medicago truncatula]
Swissprottr|O23044|PER3_ARATH1.00E-116Peroxidase 3 (Precursor)
trEMBLtr|A0A072UIQ7|A0A072UIQ7_MEDTR2.00E-177Peroxidase family protein {ECO:0000313|EMBL:KEH29649.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003743782036+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000374s00017936.1PF00141.18peroxidase681951.80E-39
Glyur000374s00017936.1PF00141.18peroxidase1992724.20E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.582
SRR1783600control6.502
SRR1783602moderate drought stress3.782
SRR1811619moderate drought stress3.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.057
DRR006520Root Summer glycyrrhizin high producing strain0.114
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.404
DRR006524Root Summer glycyrrhizin low producing strain0.354
DRR006525Leaf Summer glycyrrhizin high producing strain22.141
DRR006526Leaf Summer glycyrrhizin high producing strain21.078

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)95.066
SRR2868004Drought Stress(Tissue:root)54.568
SRR2967015Control (Tissue:root)60.583

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.010
SRR9715740Leave2.348
SRR9715741Leave2.551
SRR9715739Root1.747
SRR9715742Root0.403
SRR9715743Root1.044

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.466
SRR8749028MeJA induced 9h2.056
SRR8749029MeJA induced 9h0.900
SRR8749030Uninduced0.161
SRR8749031Uninduced0.809
SRR8749032Uninduced0.377

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.955
SRR8400027Control-Root13.525

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved