Gene detail information of Glyur000374s00017951.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15180.1 | 0 | SET domain protein 2 |
| NR | XP_004513544.1 | 0 | PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Cicer arietinum] |
| COG | YP_003280830.1 | 1.00E-10 | nuclear protein SET [Comamonas testosteroni CNB-2] |
| Swissprot | tr|O23372|ATXR3_ARATH | 0 | Probable histone-lysine N-methyltransferase ATXR3 |
| trEMBL | tr|K7KY88|K7KY88_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G45740.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00374 | 84742 | 100545 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000374s00017951.1 | PF00856.23 | SET | 1939 | 1995 | 1.20E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.226 |
| SRR1783600 | control | 26.823 |
| SRR1783602 | moderate drought stress | 29.970 |
| SRR1811619 | moderate drought stress | 34.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.835 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.097 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.032 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.896 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.489 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 41.868 |
| SRR2868004 | Drought Stress(Tissue:root) | 42.200 |
| SRR2967015 | Control (Tissue:root) | 40.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.904 |
| SRR9715740 | Leave | 21.498 |
| SRR9715741 | Leave | 34.084 |
| SRR9715739 | Root | 5.213 |
| SRR9715742 | Root | 33.211 |
| SRR9715743 | Root | 25.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.606 |
| SRR8749028 | MeJA induced 9h | 25.109 |
| SRR8749029 | MeJA induced 9h | 24.475 |
| SRR8749030 | Uninduced | 18.767 |
| SRR8749031 | Uninduced | 24.624 |
| SRR8749032 | Uninduced | 22.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 34.608 |
| SRR8400027 | Control-Root | 35.865 |