Gene detail

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Gene detail information of Glyur000374s00017967.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G03230.1	1.00E-103	S-locus lectin protein kinase family protein
NR	XP_004513553.1	1.51E-178	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum]
COG	YP_001958461.1	1.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9ZR08\|Y4230_ARATH	4.00E-133	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 (Precursor)
trEMBL	tr\|A0A072TI06\|A0A072TI06_MEDTR	1.00E-177	S-locus lectin kinase family protein {ECO:0000313\|EMBL:KEH16558.1}

Sequence

Transcript Sequence

>Glyur000374s00017967.1
CAACAGTGGCGTGGGTTGCAAACAGAGACTCCCCTGTTGCTGCTGGTTCTACCGGAGTTTTCCAAATTGCAGAGGATGGGAATTTGGTTGTTGTGGACACATCTGGTTCTACCTATTGGTCATCCAAACTCAAAGGCTCTTCTTCTTCTTCATCTTCTTCTTCCAGAAACAGGACAGTGAAACTCATGGATTCTGGTAACCTGGTGTTACTAGATGAAATGAAAATGAAACTGTGGGAGAGCTTTGTCTCCAACGACAAGGCCTTTGGGTGTACGAGAAGAAAACCAGCAGCAATATCATGCGGAAATGACACTGACACCATCACGTTCTTAAACTTGACCATGGTGAAAATAGTAGCGCCGAATCAAAGAATCACCGCAGAAGACGAACCGGATTGCAGATCCAAGTGCCTTAAGATGTGTCCCCAGTGCCAGGCTTATTCATACCCTACACCTACACAACAGCGTGGCCTTAATCTTTCCACCTGTTGGATCTGGACAGACAATTTAGCCACCCTCAAAGAAGAGTACACCGATGGCGATGGTCGTCAAATCTCTGTCCTCATTGACAAATCAGACATAGCACCAACTCCAAGAACTTGTGAACCTTGTGGCCCGAACATAGTCCCTTATCCGCTGAGTACTGGACCCAGTTGCGGAGACCTCGCATACTTCAACTTCAGCTGCAACATGTCAACGGGTCAGCTTAGCTTCTCCACCAACGCCACCAACAGTTACCGAGTCATTCGCATAGATCCACGTTCCAGAAAGTTCTATGTCGACGCCAATTCTTTTAACCGTTATCACTGCAGCGGCGAAAAATCTCAAATTCTCAAGGTTTCTCCACCGTTTAATATCACCAACGACGACAACCCGTGCTCTGAACCAGTAGGGGTTAGTTGGCAACCACCGCCGGAACCACCCTGTGCTGAGTCCACCGATTGCCACGGTTGGAAACACTCGACTTGCAAAGGGAATAGGTGTCTTTGCGATGCAAACTACAACTGGCATGGCGATCTTTTAAGTTGTACCGAAGAAGCTTTATCCAATCCTCCCAATGCTACTAATTTAGAAGAGCCAACAAGAAAGAGAAACTCCAAGAGCTCATCACTGTCTTTGATTCTTGGATTAACTCTTACAGGCGTGGTTAGTCTAGCGTGCATGATTATTTTCGCCTATGTTATATGCAGACGGAAAATTGCTCATAAGCTTAAGCAAGGTTACCCATTTCTTTGATGAGTTTAGAGGGGGATAGCATACAGAGAAACAGAGGGCGCTTTTATGACAGTGAAAGACACGTGAAGGATTTGATTGACATGGAGGGATTGGTAGAAAAAGACAACGAAGGAATAGAGGTCCCCTATTTTGATTTTGAAATCATGCTAGTGGCCACGGACCACTTCTCAGATGCAAATAAGCTCGGAAAAGGTGGTTATGGGCCAGTTTACAAGGGTAAGCTTCAAGGCGGTCAAGATATTGCNGTAAAGAGGCTTTCAAGTGTTTCATCGCAAGGCTTACAGGAATTCAAGAATGAGGTGGTTTTAATTGCCAAACTTCAACATNGGAACCTTGTTAGATTACGGGGCTATTGCGTAAAAGGAGATGAAAAAATTTTGCTCTATGAATATATGCCTAACAAGAGCTTAGACTTATTTTTATTCGATCCGACAAAAAGTGTGCTTTTGGATTGGCAAATGCGGTTTGACATAATTCTTGGGATTGCTCGTGGTATGCTTTATCTCCATCAAGACTCTAGACTCAGAGTGATTCACCGAGATTTGAAAACCAGCAACATTCTTCTAGATGCGGATATGCAACCAAAGATTTCAGATTTTGGACTNGCTAGAATATTTGGAGGCAAAGAAACTGAGGCAAACACGGAGAGAGTAGTTGGGACATATGGATACATGTCTCCTGAGTATGCATTGGATGGACAATTCTCAACAAAATCAGATGTTTTTAGCTTTGGTGTAGTCTTGCTTGAGATTATAAGTGGGAAAAAGAACACGGGATTCTATCGGTCCAAGGAAATTTCAAGCCTTTTGGGTTATGCCTGGAGACTTTGGACAGAGGACAAGTTGCCGGATTTGATGGACATATCTCTACGTGAAACTTGCAATGCAAACCAATTTATTAGTGAAACTGCAACACTCCCAACCCGAAACAACCAACATTTTTTACGCGTAAAGACCTATCTAGCACAGCTTCTTCAAGCCTGCAGGTTGAGAGCAGCATTCAGGAAGGTCGATAGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00374	172560	176066	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.7.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000374s00017967.1	PF07714.12	Pkinase_Tyr	60	277	2.30E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.433
SRR1783600	control	2.528
SRR1783602	moderate drought stress	4.258
SRR1811619	moderate drought stress	4.142

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.208
DRR006520	Root Summer glycyrrhizin high producing strain	0.243
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	3.939
DRR006524	Root Summer glycyrrhizin low producing strain	3.900
DRR006525	Leaf Summer glycyrrhizin high producing strain	65.932
DRR006526	Leaf Summer glycyrrhizin high producing strain	64.376

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	6.593
SRR2868004	Drought Stress(Tissue:root)	11.099
SRR2967015	Control (Tissue:root)	6.865

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	61.350
SRR9715740	Leave	50.341
SRR9715741	Leave	71.351
SRR9715739	Root	3.069
SRR9715742	Root	4.005
SRR9715743	Root	4.041

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.867
SRR8749028	MeJA induced 9h	6.395
SRR8749029	MeJA induced 9h	10.072
SRR8749030	Uninduced	2.046
SRR8749031	Uninduced	3.300
SRR8749032	Uninduced	1.733

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	5.200
SRR8400027	Control-Root	7.664