Gene detail information of Glyur000376s00018677.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53290.1 | 4.00E-25 | cytokinin response factor 3 |
| NR | XP_004498391.1 | 1.32E-99 | PREDICTED: ethylene-responsive transcription factor CRF3-like [Cicer arietinum] |
| Swissprot | tr|Q9FK12|CRF3_ARATH | 5.00E-41 | Ethylene-responsive transcription factor CRF3 |
| trEMBL | tr|V7AV72|V7AV72_PHAVU | 2.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW09557.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00376 | 34305 | 35318 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000376s00018677.1 | PF00847.15 | AP2 | 96 | 146 | 1.00E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.101 |
| SRR1783600 | control | 2.097 |
| SRR1783602 | moderate drought stress | 1.473 |
| SRR1811619 | moderate drought stress | 1.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.849 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.603 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.115 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.534 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.726 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.438 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.546 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.194 |
| SRR2967015 | Control (Tissue:root) | 9.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.908 |
| SRR9715740 | Leave | 1.321 |
| SRR9715741 | Leave | 1.958 |
| SRR9715739 | Root | 47.177 |
| SRR9715742 | Root | 59.285 |
| SRR9715743 | Root | 54.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.398 |
| SRR8749028 | MeJA induced 9h | 1.356 |
| SRR8749029 | MeJA induced 9h | 0.959 |
| SRR8749030 | Uninduced | 1.580 |
| SRR8749031 | Uninduced | 0.036 |
| SRR8749032 | Uninduced | 0.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.233 |
| SRR8400027 | Control-Root | 5.356 |