Gene detail information of Glyur000378s00022507.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26110.15.00E-102Protein kinase superfamily protein
NRXP_004500333.17.80E-142PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum]
COGNP_341967.16.00E-39O-sialoglycoprotein endopeptidase [Sulfolobus solfataricus P2]
Swissprottr|Q9XIC7|SERK2_ARATH4.00E-11Somatic embryogenesis receptor kinase 2 (Precursor)
trEMBLtr|I3SU70|I3SU70_LOTJA3.00E-142Uncharacterized protein {ECO:0000313|EMBL:AFK43812.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003783020737285-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000378s00022507.1PF00069.20Pkinase161622.80E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.972
SRR1783600control16.892
SRR1783602moderate drought stress17.291
SRR1811619moderate drought stress17.275

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.921
DRR006520Root Summer glycyrrhizin high producing strain19.187
DRR006521Root Winter glycyrrhizin high producing strain16.334
DRR006522Root Winter glycyrrhizin high producing strain15.532
DRR006523Root Summer glycyrrhizin low producing strain19.500
DRR006524Root Summer glycyrrhizin low producing strain19.330
DRR006525Leaf Summer glycyrrhizin high producing strain16.039
DRR006526Leaf Summer glycyrrhizin high producing strain15.093

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.090
SRR2868004Drought Stress(Tissue:root)24.871
SRR2967015Control (Tissue:root)24.794

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.961
SRR9715740Leave36.481
SRR9715741Leave28.212
SRR9715739Root11.117
SRR9715742Root22.099
SRR9715743Root19.022

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.164
SRR8749028MeJA induced 9h29.752
SRR8749029MeJA induced 9h24.216
SRR8749030Uninduced13.070
SRR8749031Uninduced11.798
SRR8749032Uninduced8.943

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.750
SRR8400027Control-Root35.290

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved