Gene detail information of Glyur000378s00022515.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17910.1 | 2.00E-11 | transferases, transferring acyl groups |
| NR | XP_004509734.1 | 1.18E-25 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At4g17910-like [Cicer arietinum] |
| Swissprot | tr|B3H6K1|Y4791_ARATH | 5.00E-13 | Uncharacterized protein At4g17910 (Precursor) |
| trEMBL | tr|G7LH17|G7LH17_MEDTR | 5.00E-26 | GPI-anchored wall transfer protein {ECO:0000313|EMBL:AET03266.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00378 | 60018 | 66240 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05283 | PIGW | EC:2.3.-.- | Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | map00563 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.354 |
| SRR1783600 | control | 3.452 |
| SRR1783602 | moderate drought stress | 4.069 |
| SRR1811619 | moderate drought stress | 4.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.539 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.935 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.834 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.523 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.323 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.624 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.836 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.981 |
| SRR2967015 | Control (Tissue:root) | 5.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.221 |
| SRR9715740 | Leave | 1.903 |
| SRR9715741 | Leave | 2.326 |
| SRR9715739 | Root | 2.502 |
| SRR9715742 | Root | 3.230 |
| SRR9715743 | Root | 2.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.854 |
| SRR8749028 | MeJA induced 9h | 5.141 |
| SRR8749029 | MeJA induced 9h | 3.076 |
| SRR8749030 | Uninduced | 2.382 |
| SRR8749031 | Uninduced | 1.030 |
| SRR8749032 | Uninduced | 1.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.379 |
| SRR8400027 | Control-Root | 8.062 |