Gene detail information of Glyur000379s00015003.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G63440.10cytokinin oxidase/dehydrogenase 6
NRXP_003538221.10PREDICTED: cytokinin dehydrogenase 6 [Glycine max]
COGYP_007093170.18.00E-77FAD linked oxidase domain-containing protein [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q9LY71|CKX6_ARATH0Cytokinin dehydrogenase 6 (Precursor)
trEMBLtr|I1LL79|I1LL79_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G20860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003793043433443+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00279CKX EC:1.5.99.12 Zeatin biosynthesis map00908


Gene Ontology

biological_process

GO:0009690  cytokinin metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0019139  cytokinin dehydrogenase activity

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000379s00015003.1PF01565.18FAD_binding_4922351.00E-19
Glyur000379s00015003.1PF09265.5Cytokin-bind2675432.70E-112


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.993
SRR1783600control7.209
SRR1783602moderate drought stress7.134
SRR1811619moderate drought stress7.066

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.238
DRR006520Root Summer glycyrrhizin high producing strain2.183
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.992
DRR006524Root Summer glycyrrhizin low producing strain1.994
DRR006525Leaf Summer glycyrrhizin high producing strain5.850
DRR006526Leaf Summer glycyrrhizin high producing strain6.102

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.238
SRR2868004Drought Stress(Tissue:root)12.306
SRR2967015Control (Tissue:root)3.783

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.515
SRR9715740Leave4.534
SRR9715741Leave0.583
SRR9715739Root1.515
SRR9715742Root2.779
SRR9715743Root2.561

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.235
SRR8749028MeJA induced 9h3.703
SRR8749029MeJA induced 9h3.386
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.024

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.699
SRR8400027Control-Root3.927

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved