Gene detail information of Glyur000379s00015020.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13780.1 | 3.00E-83 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_004514569.1 | 1.83E-128 | PREDICTED: N-alpha-acetyltransferase 10-like [Cicer arietinum] |
| COG | YP_004781726.1 | 7.00E-32 | ribosomal-protein-alanine acetyltransferase [Pyrolobus fumarii 1A] |
| trEMBL | tr|V7AJP6|V7AJP6_PHAVU | 2.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:ESW05485.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00379 | 106496 | 108156 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000379s00015020.1 | PF00583.19 | Acetyltransf_1 | 49 | 129 | 8.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 62.845 |
| SRR1783600 | control | 61.351 |
| SRR1783602 | moderate drought stress | 50.353 |
| SRR1811619 | moderate drought stress | 48.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 67.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 71.483 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 67.077 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 102.764 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 102.420 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.677 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 61.885 |
| SRR2868004 | Drought Stress(Tissue:root) | 58.155 |
| SRR2967015 | Control (Tissue:root) | 59.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 41.638 |
| SRR9715740 | Leave | 38.399 |
| SRR9715741 | Leave | 43.768 |
| SRR9715739 | Root | 120.207 |
| SRR9715742 | Root | 63.419 |
| SRR9715743 | Root | 69.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 93.583 |
| SRR8749028 | MeJA induced 9h | 55.075 |
| SRR8749029 | MeJA induced 9h | 57.701 |
| SRR8749030 | Uninduced | 32.461 |
| SRR8749031 | Uninduced | 12.528 |
| SRR8749032 | Uninduced | 48.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 62.448 |
| SRR8400027 | Control-Root | 60.050 |