Gene detail information of Glyur000380s00017144.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13280.10aspartate kinase 1
NRXP_003553303.10PREDICTED: aspartokinase 1, chloroplastic-like isoform X1 [Glycine max]
COGYP_001996257.14.00E-88aspartate kinase III [Chloroherpeton thalassium ATCC 35110]
Swissprottr|Q9LYU8|AK1_ARATH0Aspartokinase 1, chloroplastic (Precursor)
trEMBLtr|I1N803|I1N803_SOYBN0Aspartokinase {ECO:0000256|RuleBase:RU003448}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00380129183138509-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00928lysC EC:2.7.2.4 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Glycine, serine and threonine metabolismmap00260
Cysteine and methionine metabolismmap00270
Lysine biosynthesismap00300
Monobactam biosynthesismap00261


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0008652  cellular amino acid biosynthetic process


molecular_function

GO:0004072  aspartate kinase activity

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000380s00017144.1PF00696.23AA_kinase903901.40E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.865
SRR1783600control1.913
SRR1783602moderate drought stress1.712
SRR1811619moderate drought stress1.695

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.034
DRR006520Root Summer glycyrrhizin high producing strain6.993
DRR006521Root Winter glycyrrhizin high producing strain7.179
DRR006522Root Winter glycyrrhizin high producing strain7.020
DRR006523Root Summer glycyrrhizin low producing strain4.625
DRR006524Root Summer glycyrrhizin low producing strain4.608
DRR006525Leaf Summer glycyrrhizin high producing strain5.491
DRR006526Leaf Summer glycyrrhizin high producing strain5.501

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.108
SRR2868004Drought Stress(Tissue:root)11.156
SRR2967015Control (Tissue:root)11.017

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.661
SRR9715740Leave11.872
SRR9715741Leave9.869
SRR9715739Root1.169
SRR9715742Root4.585
SRR9715743Root5.273

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.757
SRR8749028MeJA induced 9h10.184
SRR8749029MeJA induced 9h7.604
SRR8749030Uninduced4.625
SRR8749031Uninduced5.464
SRR8749032Uninduced6.171

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.495
SRR8400027Control-Root12.909

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved