Gene detail information of Glyur000381s00016132.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G29320.10Glycosyl transferase, family 35
NRXP_007158624.10hypothetical protein PHAVU_002G168400g [Phaseolus vulgaris]
COGYP_901905.10glycogen/starch/alpha-glucan phosphorylase [Pelobacter propionicus DSM 2379]
Swissprottr|P53535|PHSL2_SOLTU0Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic (Precursor)
trEMBLtr|V7CMM8|V7CMM8_PHAVU0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003818499093900+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00688PYG, glgP EC:2.4.1.1 Starch and sucrose metabolism map00500
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004645  phosphorylase activity

GO:0008184  glycogen phosphorylase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000381s00016132.1PF00343.15Phosphorylase1614041.00E-100
Glyur000381s00016132.1PF00343.15Phosphorylase5399371.40E-171


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.712
SRR1783600control1.709
SRR1783602moderate drought stress1.555
SRR1811619moderate drought stress1.528

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.138
DRR006520Root Summer glycyrrhizin high producing strain1.117
DRR006521Root Winter glycyrrhizin high producing strain4.398
DRR006522Root Winter glycyrrhizin high producing strain4.432
DRR006523Root Summer glycyrrhizin low producing strain0.843
DRR006524Root Summer glycyrrhizin low producing strain0.798
DRR006525Leaf Summer glycyrrhizin high producing strain6.356
DRR006526Leaf Summer glycyrrhizin high producing strain6.195

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.068
SRR2868004Drought Stress(Tissue:root)1.467
SRR2967015Control (Tissue:root)1.383

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.124
SRR9715740Leave25.116
SRR9715741Leave22.196
SRR9715739Root0.044
SRR9715742Root0.544
SRR9715743Root0.537

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.349
SRR8749028MeJA induced 9h2.925
SRR8749029MeJA induced 9h2.220
SRR8749030Uninduced3.169
SRR8749031Uninduced7.793
SRR8749032Uninduced5.738

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.964
SRR8400027Control-Root1.116

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved