Gene detail information of Glyur000381s00016140.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G26560.11.00E-97beta glucosidase 40
NRAES89992.26.03E-134beta-glucosidase [Medicago truncatula]
COGYP_003323667.12.00E-55beta-galactosidase [Thermobaculum terrenum ATCC BAA-798]
Swissprottr|Q9FZE0|BGL40_ARATH6.00E-117Beta-glucosidase 40 (Precursor)
trEMBLtr|G7JHH5|G7JHH5_MEDTR2.00E-134Beta-glucosidase {ECO:0000313|EMBL:AES89992.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00381119406134775-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000381s00016140.3PF00232.13Glyco_hydro_13542.70E-18
Glyur000381s00016140.3PF00232.13Glyco_hydro_1552992.20E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.629
SRR1783600control5.828
SRR1783602moderate drought stress3.037
SRR1811619moderate drought stress2.938

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.862
DRR006520Root Summer glycyrrhizin high producing strain3.634
DRR006521Root Winter glycyrrhizin high producing strain0.084
DRR006522Root Winter glycyrrhizin high producing strain0.082
DRR006523Root Summer glycyrrhizin low producing strain6.697
DRR006524Root Summer glycyrrhizin low producing strain6.737
DRR006525Leaf Summer glycyrrhizin high producing strain3.134
DRR006526Leaf Summer glycyrrhizin high producing strain3.551

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.499
SRR2868004Drought Stress(Tissue:root)11.662
SRR2967015Control (Tissue:root)9.428

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.732
SRR9715740Leave4.612
SRR9715741Leave3.145
SRR9715739Root1.678
SRR9715742Root3.265
SRR9715743Root2.492

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.609
SRR8749028MeJA induced 9h0.770
SRR8749029MeJA induced 9h1.001
SRR8749030Uninduced0.356
SRR8749031Uninduced0.181
SRR8749032Uninduced0.080

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.250
SRR8400027Control-Root5.570

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved