Gene detail information of Glyur000382s00020370.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03415.1 | 1.00E-102 | Transcription factor DP |
| NR | XP_004505605.1 | 0 | PREDICTED: transcription factor-like protein DPB-like [Cicer arietinum] |
| Swissprot | tr|Q9FNY2|DPB_ARATH | 2.00E-125 | Transcription factor-like protein DPB |
| trEMBL | tr|A0A072UMP7|A0A072UMP7_MEDTR | 0 | Transcription factor DP, E2 dimerization partner protein {ECO:0000313|EMBL:KEH30661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00382 | 56496 | 60980 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | E2F-DP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000382s00020370.1 | PF02319.15 | E2F_TDP | 93 | 175 | 3.60E-25 |
| Glyur000382s00020370.1 | PF08781.5 | DP | 182 | 312 | 2.80E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.751 |
| SRR1783600 | control | 7.348 |
| SRR1783602 | moderate drought stress | 5.481 |
| SRR1811619 | moderate drought stress | 5.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.191 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.956 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.812 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.660 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.048 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.289 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.049 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.913 |
| SRR2967015 | Control (Tissue:root) | 13.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.047 |
| SRR9715740 | Leave | 3.997 |
| SRR9715741 | Leave | 6.324 |
| SRR9715739 | Root | 2.126 |
| SRR9715742 | Root | 5.086 |
| SRR9715743 | Root | 4.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.652 |
| SRR8749028 | MeJA induced 9h | 20.846 |
| SRR8749029 | MeJA induced 9h | 14.307 |
| SRR8749030 | Uninduced | 16.987 |
| SRR8749031 | Uninduced | 5.327 |
| SRR8749032 | Uninduced | 5.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.239 |
| SRR8400027 | Control-Root | 11.513 |