Gene detail information of Glyur000382s00020376.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G16910.11.00E-131cellulose-synthase like D2
NRXP_004505600.19.12E-163PREDICTED: cellulose synthase-like protein D3-like isoform X1 [Cicer arietinum]
Swissprottr|Q9LFL0|CSLD2_ARATH8.00E-155Cellulose synthase-like protein D2
trEMBLtr|V7AF90|V7AF90_PHAVU5.00E-162Uncharacterized protein {ECO:0000313|EMBL:ESW03518.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003829741198429+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016760  cellulose synthase (UDP-forming) activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000382s00020376.1PF03552.9Cellulose_synt31151.50E-43
Glyur000382s00020376.1PF03552.9Cellulose_synt1462872.50E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.220
SRR1783600control5.228
SRR1783602moderate drought stress1.406
SRR1811619moderate drought stress1.450

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.944
DRR006520Root Summer glycyrrhizin high producing strain3.496
DRR006521Root Winter glycyrrhizin high producing strain0.252
DRR006522Root Winter glycyrrhizin high producing strain0.547
DRR006523Root Summer glycyrrhizin low producing strain1.163
DRR006524Root Summer glycyrrhizin low producing strain1.398
DRR006525Leaf Summer glycyrrhizin high producing strain0.516
DRR006526Leaf Summer glycyrrhizin high producing strain0.727

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.862
SRR2868004Drought Stress(Tissue:root)0.308
SRR2967015Control (Tissue:root)0.508

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.155
SRR9715740Leave0.000
SRR9715741Leave0.448
SRR9715739Root0.000
SRR9715742Root0.302
SRR9715743Root0.436

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.330
SRR8749028MeJA induced 9h0.252
SRR8749029MeJA induced 9h0.172
SRR8749030Uninduced0.836
SRR8749031Uninduced0.067
SRR8749032Uninduced0.167

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.814
SRR8400027Control-Root2.413