Gene detail information of Glyur000384s00022273.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67310.10Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
NRXP_004502279.10PREDICTED: calmodulin-binding transcription activator 4-like [Cicer arietinum]
Swissprottr|Q9FYG2|CMTA4_ARATH0Calmodulin-binding transcription activator 4
trEMBLtr|G7JBF2|G7JBF2_MEDTR0Calmodulin-binding protein {ECO:0000313|EMBL:AES72007.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003842811038307+


Gene family

Gene familysubfamily
Transcription Factors FamilyCAMTA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000384s00022273.1PF03859.11CG-1141106.90E-40
Glyur000384s00022273.1PF12796.2Ank_25606197.70E-08
Glyur000384s00022273.1PF00612.22IQ7667840.0056
Glyur000384s00022273.1PF00612.22IQ7888082.50E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.095
SRR1783600control17.043
SRR1783602moderate drought stress20.386
SRR1811619moderate drought stress20.265

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.481
DRR006520Root Summer glycyrrhizin high producing strain21.174
DRR006521Root Winter glycyrrhizin high producing strain27.583
DRR006522Root Winter glycyrrhizin high producing strain26.874
DRR006523Root Summer glycyrrhizin low producing strain19.949
DRR006524Root Summer glycyrrhizin low producing strain19.960
DRR006525Leaf Summer glycyrrhizin high producing strain5.265
DRR006526Leaf Summer glycyrrhizin high producing strain5.283

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.796
SRR2868004Drought Stress(Tissue:root)36.019
SRR2967015Control (Tissue:root)34.423

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.999
SRR9715740Leave18.099
SRR9715741Leave25.122
SRR9715739Root7.910
SRR9715742Root37.185
SRR9715743Root36.788

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.464
SRR8749028MeJA induced 9h25.942
SRR8749029MeJA induced 9h21.429
SRR8749030Uninduced19.461
SRR8749031Uninduced14.738
SRR8749032Uninduced14.275

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.886
SRR8400027Control-Root21.666

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved