Gene detail information of Glyur000384s00022276.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17550.14.00E-60homology to ABI2
NRXP_006601194.13.75E-127PREDICTED: protein phosphatase 2C 16-like isoform X8 [Glycine max]
Swissprottr|Q9LNP9|P2C07_ARATH2.00E-72Protein phosphatase 2C 7 (Precursor)
trEMBLtr|K7MN95|K7MN95_SOYBN1.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33410.7}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003844444145435+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000384s00022276.1PF00481.16PP2C992275.60E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.741
SRR1783600control2.331
SRR1783602moderate drought stress2.852
SRR1811619moderate drought stress2.417

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.821
DRR006520Root Summer glycyrrhizin high producing strain3.362
DRR006521Root Winter glycyrrhizin high producing strain1.195
DRR006522Root Winter glycyrrhizin high producing strain1.096
DRR006523Root Summer glycyrrhizin low producing strain4.537
DRR006524Root Summer glycyrrhizin low producing strain2.811
DRR006525Leaf Summer glycyrrhizin high producing strain3.529
DRR006526Leaf Summer glycyrrhizin high producing strain2.446

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.950
SRR2868004Drought Stress(Tissue:root)3.576
SRR2967015Control (Tissue:root)2.734

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.722
SRR9715740Leave6.653
SRR9715741Leave9.297
SRR9715739Root3.942
SRR9715742Root5.583
SRR9715743Root4.900

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.852
SRR8749028MeJA induced 9h0.395
SRR8749029MeJA induced 9h0.272
SRR8749030Uninduced0.070
SRR8749031Uninduced0.302
SRR8749032Uninduced0.604

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.250
SRR8400027Control-Root5.516

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved