Gene detail information of Glyur000384s00022277.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27320.10histidine kinase 3
NRAES72013.20cytokinin receptor histidine kinase [Medicago truncatula]
COGYP_008089003.12.00E-77PAS domain S-box [Chthonomonas calidirosea T49]
Swissprottr|Q9C5U1|AHK3_ARATH0Histidine kinase 3
trEMBLtr|G7JBF8|G7JBF8_MEDTR0Cytokinin receptor histidine kinase {ECO:0000313|EMBL:AES72013.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003844722254281-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14489AHK2_3_4 EC:2.7.13.3 Plant hormone signal transduction map04075


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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000384s00022277.1PF03924.8CHASE1653651.90E-42
Glyur000384s00022277.1PF00512.20HisKA4515161.50E-17
Glyur000384s00022277.1PF02518.21HATPase_c5547017.70E-22
Glyur000384s00022277.1PF00072.19Response_reg88310073.20E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.363
SRR1783600control25.337
SRR1783602moderate drought stress27.008
SRR1811619moderate drought stress27.066

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.947
DRR006520Root Summer glycyrrhizin high producing strain24.953
DRR006521Root Winter glycyrrhizin high producing strain19.119
DRR006522Root Winter glycyrrhizin high producing strain18.897
DRR006523Root Summer glycyrrhizin low producing strain30.084
DRR006524Root Summer glycyrrhizin low producing strain29.572
DRR006525Leaf Summer glycyrrhizin high producing strain12.751
DRR006526Leaf Summer glycyrrhizin high producing strain12.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.294
SRR2868004Drought Stress(Tissue:root)94.664
SRR2967015Control (Tissue:root)94.542

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.777
SRR9715740Leave38.136
SRR9715741Leave38.084
SRR9715739Root14.099
SRR9715742Root49.664
SRR9715743Root44.873

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.167
SRR8749028MeJA induced 9h42.667
SRR8749029MeJA induced 9h9.774
SRR8749030Uninduced26.381
SRR8749031Uninduced8.214
SRR8749032Uninduced7.751

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root67.161
SRR8400027Control-Root60.139

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved