Gene detail information of Glyur000386s00015340.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71380.10cellulase 3
NRKHN24805.10Endoglucanase 9 [Glycine soja]
COGYP_290232.17.00E-79endoglucanase [Thermobifida fusca YX]
Swissprottr|Q9C9H5|GUN9_ARATH0Endoglucanase 9 (Precursor)
trEMBLtr|V7BRQ0|V7BRQ0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW20634.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00386137962141857+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH9


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01179E3.2.1.4 EC:3.2.1.4 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000386s00015340.1PF00759.14Glyco_hydro_9264643.50E-159


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.045
SRR1783600control46.519
SRR1783602moderate drought stress20.770
SRR1811619moderate drought stress20.512

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain63.710
DRR006520Root Summer glycyrrhizin high producing strain62.773
DRR006521Root Winter glycyrrhizin high producing strain0.127
DRR006522Root Winter glycyrrhizin high producing strain0.243
DRR006523Root Summer glycyrrhizin low producing strain32.955
DRR006524Root Summer glycyrrhizin low producing strain33.001
DRR006525Leaf Summer glycyrrhizin high producing strain1.038
DRR006526Leaf Summer glycyrrhizin high producing strain1.195

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)86.091
SRR2868004Drought Stress(Tissue:root)80.860
SRR2967015Control (Tissue:root)92.649

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.475
SRR9715740Leave0.000
SRR9715741Leave0.254
SRR9715739Root11.007
SRR9715742Root6.102
SRR9715743Root5.310

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h974.110
SRR8749028MeJA induced 9h401.222
SRR8749029MeJA induced 9h421.158
SRR8749030Uninduced0.292
SRR8749031Uninduced1.277
SRR8749032Uninduced5.219

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root97.775
SRR8400027Control-Root84.399

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved