Gene detail information of Glyur000387s00017696.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06410.10trehalose-phosphatase/synthase 7
NRXP_004505467.10PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Cicer arietinum]
COGYP_004625437.12.00E-130alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
Swissprottr|Q9LMI0|TPS7_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
trEMBLtr|I1LSH8|I1LSH8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G15500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003875242657404+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017696.1PF00982.16Glyco_transf_20635462.20E-178
Glyur000387s00017696.1PF02358.11Trehalose_PPase5968314.50E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.903
SRR1783600control13.073
SRR1783602moderate drought stress10.536
SRR1811619moderate drought stress10.470

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.158
DRR006520Root Summer glycyrrhizin high producing strain21.556
DRR006521Root Winter glycyrrhizin high producing strain12.228
DRR006522Root Winter glycyrrhizin high producing strain11.977
DRR006523Root Summer glycyrrhizin low producing strain26.449
DRR006524Root Summer glycyrrhizin low producing strain25.727
DRR006525Leaf Summer glycyrrhizin high producing strain13.685
DRR006526Leaf Summer glycyrrhizin high producing strain13.257

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.822
SRR2868004Drought Stress(Tissue:root)64.951
SRR2967015Control (Tissue:root)62.175

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave121.766
SRR9715740Leave67.427
SRR9715741Leave163.424
SRR9715739Root12.966
SRR9715742Root82.349
SRR9715743Root72.702

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.471
SRR8749028MeJA induced 9h54.974
SRR8749029MeJA induced 9h51.058
SRR8749030Uninduced58.174
SRR8749031Uninduced108.768
SRR8749032Uninduced77.356

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.893
SRR8400027Control-Root32.544

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved