Gene detail information of Glyur000387s00017697.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30970.20aspartate aminotransferase 1
NRXP_004505477.10PREDICTED: aspartate aminotransferase, mitochondrial-like [Cicer arietinum]
COGYP_001100500.12.00E-122aromatic amino acid aminotransferase [Herminiimonas arsenicoxydans]
Swissprottr|P46643|AAT1_ARATH0Aspartate aminotransferase, mitochondrial (Precursor)
trEMBLtr|G7JCN3|G7JCN3_MEDTR0Aspartate aminotransferase {ECO:0000256|RuleBase:RU000480}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003876017866004+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14455GOT2 EC:2.6.1.1 Carbon metabolism map01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Carbon fixation in photosynthetic organismsmap00710
Alanine, aspartate and glutamate metabolismmap00250
Cysteine and methionine metabolismmap00270
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960
Fat digestion and absorptionmap04975


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017697.1PF00155.16Aminotran_1_2524171.60E-88


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.827
SRR1783600control2.880
SRR1783602moderate drought stress1.580
SRR1811619moderate drought stress1.529

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.811
DRR006520Root Summer glycyrrhizin high producing strain2.846
DRR006521Root Winter glycyrrhizin high producing strain2.094
DRR006522Root Winter glycyrrhizin high producing strain2.190
DRR006523Root Summer glycyrrhizin low producing strain4.063
DRR006524Root Summer glycyrrhizin low producing strain4.171
DRR006525Leaf Summer glycyrrhizin high producing strain14.640
DRR006526Leaf Summer glycyrrhizin high producing strain14.591

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.714
SRR2868004Drought Stress(Tissue:root)18.671
SRR2967015Control (Tissue:root)17.681

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.626
SRR9715740Leave16.368
SRR9715741Leave28.391
SRR9715739Root0.994
SRR9715742Root5.324
SRR9715743Root4.907

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.993
SRR8749028MeJA induced 9h15.563
SRR8749029MeJA induced 9h21.789
SRR8749030Uninduced64.350
SRR8749031Uninduced75.296
SRR8749032Uninduced49.903

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.200
SRR8400027Control-Root5.571

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved