Gene detail information of Glyur000387s00017699.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30980.10SHAGGY-related protein kinase dZeta
NRKHN33940.10Shaggy-related protein kinase zeta [Glycine soja]
COGYP_008149401.11.00E-23hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|I1LSH6|I1LSH6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G15470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003876795673031-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14502BIN2 EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017699.1PF00069.20Pkinase783591.10E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.003
SRR1783600control29.326
SRR1783602moderate drought stress29.740
SRR1811619moderate drought stress29.110

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.261
DRR006520Root Summer glycyrrhizin high producing strain33.720
DRR006521Root Winter glycyrrhizin high producing strain33.886
DRR006522Root Winter glycyrrhizin high producing strain32.925
DRR006523Root Summer glycyrrhizin low producing strain52.361
DRR006524Root Summer glycyrrhizin low producing strain51.979
DRR006525Leaf Summer glycyrrhizin high producing strain20.922
DRR006526Leaf Summer glycyrrhizin high producing strain20.891

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.615
SRR2868004Drought Stress(Tissue:root)30.155
SRR2967015Control (Tissue:root)29.099

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.931
SRR9715740Leave21.899
SRR9715741Leave25.112
SRR9715739Root15.739
SRR9715742Root21.165
SRR9715743Root20.832

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.356
SRR8749028MeJA induced 9h25.140
SRR8749029MeJA induced 9h20.659
SRR8749030Uninduced14.305
SRR8749031Uninduced15.582
SRR8749032Uninduced15.033

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.734
SRR8400027Control-Root41.917

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved