Gene detail information of Glyur000387s00017709.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58680.18.00E-67multiprotein bridging factor 1B
NRXP_007149730.16.10E-92hypothetical protein PHAVU_005G094400g [Phaseolus vulgaris]
COGYP_007249079.12.00E-06TIGR00270 family protein [Methanoregula formicica SMSP]
Swissprottr|Q9LXT3|MBF1B_ARATH8.00E-85Multiprotein-bridging factor 1b
trEMBLtr|V7BUV4|V7BUV4_PHAVU2.00E-92Uncharacterized protein {ECO:0000313|EMBL:ESW21724.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00387103179107410-


Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0043565  sequence-specific DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017709.1PF08523.5MBF19793.20E-26
Glyur000387s00017709.1PF01381.17HTH_3871378.70E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.429
SRR1783600control38.394
SRR1783602moderate drought stress69.985
SRR1811619moderate drought stress69.566

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.263
DRR006520Root Summer glycyrrhizin high producing strain58.139
DRR006521Root Winter glycyrrhizin high producing strain32.224
DRR006522Root Winter glycyrrhizin high producing strain30.525
DRR006523Root Summer glycyrrhizin low producing strain74.978
DRR006524Root Summer glycyrrhizin low producing strain74.581
DRR006525Leaf Summer glycyrrhizin high producing strain45.562
DRR006526Leaf Summer glycyrrhizin high producing strain44.606

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)59.054
SRR2868004Drought Stress(Tissue:root)69.454
SRR2967015Control (Tissue:root)77.565

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.504
SRR9715740Leave78.985
SRR9715741Leave74.057
SRR9715739Root76.132
SRR9715742Root64.813
SRR9715743Root60.842

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.765
SRR8749028MeJA induced 9h36.900
SRR8749029MeJA induced 9h88.903
SRR8749030Uninduced59.846
SRR8749031Uninduced92.914
SRR8749032Uninduced135.960

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root74.950
SRR8400027Control-Root77.617

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved