Gene detail information of Glyur000387s00017715.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58640.21.00E-69Mitogen activated protein kinase kinase kinase-related
NRXP_004505488.12.10E-94PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum]
COGYP_828710.15.00E-20serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q9FPR3|EDR1_ARATH1.00E-42Serine/threonine-protein kinase EDR1
trEMBLtr|K7LUH0|K7LUH0_SOYBN8.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G15370.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00387141795152429+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017715.1PF07714.12Pkinase_Tyr21373.90E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.484
SRR1783600control9.253
SRR1783602moderate drought stress10.068
SRR1811619moderate drought stress10.380

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.976
DRR006520Root Summer glycyrrhizin high producing strain15.969
DRR006521Root Winter glycyrrhizin high producing strain18.676
DRR006522Root Winter glycyrrhizin high producing strain18.270
DRR006523Root Summer glycyrrhizin low producing strain12.906
DRR006524Root Summer glycyrrhizin low producing strain12.955
DRR006525Leaf Summer glycyrrhizin high producing strain9.585
DRR006526Leaf Summer glycyrrhizin high producing strain9.640

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.692
SRR2868004Drought Stress(Tissue:root)36.120
SRR2967015Control (Tissue:root)38.253

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.336
SRR9715740Leave14.150
SRR9715741Leave18.438
SRR9715739Root4.878
SRR9715742Root19.153
SRR9715743Root18.969

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.932
SRR8749028MeJA induced 9h17.806
SRR8749029MeJA induced 9h13.811
SRR8749030Uninduced9.769
SRR8749031Uninduced8.714
SRR8749032Uninduced7.020

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.241
SRR8400027Control-Root30.338

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved