Gene detail information of Glyur000387s00017717.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42620.1 | 0 | RNI-like superfamily protein |
| NR | XP_007132849.1 | 0 | hypothetical protein PHAVU_011G129700g [Phaseolus vulgaris] |
| Swissprot | tr|I1SSI5|MAX2A_PETHY | 0 | F-box/LRR-repeat MAX2 homolog A |
| trEMBL | tr|V7AJ07|V7AJ07_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04843.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00387 | 153756 | 155942 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | F-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.001 |
| SRR1783600 | control | 10.989 |
| SRR1783602 | moderate drought stress | 27.458 |
| SRR1811619 | moderate drought stress | 27.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.893 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.187 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.727 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.860 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.172 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.117 |
| SRR2868004 | Drought Stress(Tissue:root) | 38.105 |
| SRR2967015 | Control (Tissue:root) | 46.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.727 |
| SRR9715740 | Leave | 19.798 |
| SRR9715741 | Leave | 24.663 |
| SRR9715739 | Root | 18.249 |
| SRR9715742 | Root | 18.308 |
| SRR9715743 | Root | 15.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.466 |
| SRR8749028 | MeJA induced 9h | 23.221 |
| SRR8749029 | MeJA induced 9h | 15.510 |
| SRR8749030 | Uninduced | 7.600 |
| SRR8749031 | Uninduced | 4.494 |
| SRR8749032 | Uninduced | 10.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.327 |
| SRR8400027 | Control-Root | 16.162 |