Gene detail information of Glyur000387s00017719.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58630.1 | 1.00E-42 | sequence-specific DNA binding transcription factors |
| NR | XP_004505494.1 | 1.38E-146 | PREDICTED: uncharacterized protein LOC101509429 isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 4.00E-53 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|A0A072UNW3|A0A072UNW3_MEDTR | 5.00E-143 | Sequence-specific DNA-binding transcription factors protein, putative {ECO:0000313|EMBL:KEH30728.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00387 | 161342 | 163390 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000387s00017719.1 | PF13837.1 | Myb_DNA-bind_4 | 28 | 125 | 3.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.550 |
| SRR1783600 | control | 15.650 |
| SRR1783602 | moderate drought stress | 23.438 |
| SRR1811619 | moderate drought stress | 23.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.596 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.256 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.382 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.874 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.711 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.401 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.872 |
| SRR2868004 | Drought Stress(Tissue:root) | 17.608 |
| SRR2967015 | Control (Tissue:root) | 20.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.122 |
| SRR9715740 | Leave | 18.422 |
| SRR9715741 | Leave | 17.476 |
| SRR9715739 | Root | 15.788 |
| SRR9715742 | Root | 19.128 |
| SRR9715743 | Root | 17.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.785 |
| SRR8749028 | MeJA induced 9h | 11.013 |
| SRR8749029 | MeJA induced 9h | 15.601 |
| SRR8749030 | Uninduced | 9.026 |
| SRR8749031 | Uninduced | 6.324 |
| SRR8749032 | Uninduced | 11.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.503 |
| SRR8400027 | Control-Root | 13.478 |