Gene detail information of Glyur000389s00028186.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02030.1 | 6.00E-57 | POX (plant homeobox) family protein |
| NR | XP_007140461.1 | 0 | hypothetical protein PHAVU_008G114300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LZM8|BLH9_ARATH | 1.00E-80 | BEL1-like homeodomain protein 9 |
| trEMBL | tr|V7B4E5|V7B4E5_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW12455.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00389 | 63198 | 68796 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000389s00028186.1 | PF07526.6 | POX | 228 | 360 | 1.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.214 |
| SRR1783600 | control | 19.463 |
| SRR1783602 | moderate drought stress | 24.681 |
| SRR1811619 | moderate drought stress | 24.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.313 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.403 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.966 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.353 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.156 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.710 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.245 |
| SRR2967015 | Control (Tissue:root) | 3.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.730 |
| SRR9715740 | Leave | 2.418 |
| SRR9715741 | Leave | 1.521 |
| SRR9715739 | Root | 1.703 |
| SRR9715742 | Root | 24.542 |
| SRR9715743 | Root | 18.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.736 |
| SRR8749028 | MeJA induced 9h | 4.911 |
| SRR8749029 | MeJA induced 9h | 1.061 |
| SRR8749030 | Uninduced | 1.217 |
| SRR8749031 | Uninduced | 0.377 |
| SRR8749032 | Uninduced | 1.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.458 |
| SRR8400027 | Control-Root | 9.976 |