Gene detail information of Glyur000389s00028194.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09270.11.00E-31glutathione S-transferase TAU 8
NRXP_003623195.16.83E-84Glutathione S-transferase GST [Medicago truncatula]
Swissprottr|P32110|GSTX6_SOYBN6.00E-81Probable glutathione S-transferase
trEMBLtr|G7L6G9|G7L6G9_MEDTR3.00E-84Uncharacterized protein {ECO:0000313|EMBL:AFK38518.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00389166407167697+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000389s00028194.1PF13417.1GST_N_310934.50E-08
Glyur000389s00028194.1PF00043.20GST_C661506.60E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control83.972
SRR1783600control84.785
SRR1783602moderate drought stress60.846
SRR1811619moderate drought stress60.422

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.311
DRR006520Root Summer glycyrrhizin high producing strain9.166
DRR006521Root Winter glycyrrhizin high producing strain8.632
DRR006522Root Winter glycyrrhizin high producing strain8.182
DRR006523Root Summer glycyrrhizin low producing strain14.675
DRR006524Root Summer glycyrrhizin low producing strain13.044
DRR006525Leaf Summer glycyrrhizin high producing strain4.825
DRR006526Leaf Summer glycyrrhizin high producing strain4.936

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)349.748
SRR2868004Drought Stress(Tissue:root)1299.921
SRR2967015Control (Tissue:root)489.188

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave135.428
SRR9715740Leave212.551
SRR9715741Leave315.935
SRR9715739Root76.191
SRR9715742Root130.278
SRR9715743Root118.841

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h372.557
SRR8749028MeJA induced 9h633.064
SRR8749029MeJA induced 9h602.630
SRR8749030Uninduced828.777
SRR8749031Uninduced1056.824
SRR8749032Uninduced635.651

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root382.045
SRR8400027Control-Root238.100

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved