Gene detail

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Gene detail information of Glyur000390s00023090.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51550.1	1.00E-118	Malectin/receptor-like protein kinase family protein
NR	XP_007151348.1	0	hypothetical protein PHAVU_004G038800g [Phaseolus vulgaris]
COG	YP_008151634.1	2.00E-22	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	3.00E-145	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|V7BZJ4\|V7BZJ4_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW23342.1}

Sequence

Transcript Sequence

>Glyur000390s00023090.1
AACTCATCTCTACCGTCGCATCTTTGCCGTCTGTTCTCCCTCGCCGAGATCCGCGCCGCCACAAACAACTTCGACGAGCACTTCATCGTCGGCGTAGGTGGATTNGGCCACGTGTACAAGGGCTACACCGAGGGAGCCACCCCCGTCGCCATCAAGCGGTTAAAACCAGGTTCACAACAAGGCGCTAATGAGTTCGTCAACGAGATCGACATGCTCTCGAAGCTTCGTCACCTTCACCTNGTTTCCCTCATCGGTTACTGCCACGAGAGCAACGAGATGATCCTCGTCTACGACTTCATGGCGCGTGGAACCCTACGCGACNATCTCTANAACACCGATAACCCTCCACTCTCGTGGAAGCAGCGGTTGCANATCTGTATCGGTGCCGCNCGTGGGTTGCATTACCTCCATACAGGCGCGAAGTACACGATCATCCACCGCNACGTGAAAACCACGAACATCCTGTTAGNCGAGAAGTGGGTCGCGAAGGTTTCGGATTTTGGGCTTTCTCGAATTGGGCCCACTGGTGTGTCCAAGTCCCATGTTAGAACCGATGTTAAAGGGACCATTGGGTATTTGGACCCGGAGTATTACAAACGGCTGCGTTTAACGGAGAAATCTGACGTGTACTCTTTTGGTGTGGTGCTGTTTGAGATCCTCTGCGCTCGGCCGCCGCTGATTCATACCGTGGAGAAGACACAGGTGTCGCTCGCTGATTGGGCGAGGCAGTGTCACCAGAATGGGACATTGTGGCAGATTGTGGACCCCNCGATGAAAGGGAGCATAGNGCCAGAGTGTTTGAGNAAGTTCGGGGAGATTGGTGTGAGTTGTTTGTTGGACGATGGGACACAGAGGCCGTCGATGAATGACGTCGTTTGGATGCTCGAGTTTGCGCTTCAGTTGCAAGAGAGTGCAGAACAGTGTGATTGTGGTGACGCGAAAGGAATTGGGAGGAGAAGAGAAGAGANTGATGACTTCTTTCGATTGACTACGTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00390	2	1701	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000390s00023090.1	PF07714.12	Pkinase_Tyr	30	294	7.00E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.183
SRR1783600	control	0.288
SRR1783602	moderate drought stress	0.439
SRR1811619	moderate drought stress	0.416

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.055
DRR006522	Root Winter glycyrrhizin high producing strain	0.108
DRR006523	Root Summer glycyrrhizin low producing strain	1.817
DRR006524	Root Summer glycyrrhizin low producing strain	1.538
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.901
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.955

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.265
SRR2868004	Drought Stress(Tissue:root)	0.638
SRR2967015	Control (Tissue:root)	1.294

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	10.396
SRR9715740	Leave	18.285
SRR9715741	Leave	23.327
SRR9715739	Root	0.733
SRR9715742	Root	2.044
SRR9715743	Root	2.154

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.001
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.016
SRR8400027	Control-Root	0.894