Gene detail

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Gene detail information of Glyur000390s00023104.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G30180.1	0	brassinosteroid-6-oxidase 2
NR	XP_007151377.1	0	hypothetical protein PHAVU_004G041700g [Phaseolus vulgaris]
COG	YP_007055574.1	7.00E-56	cytochrome P450 [Rivularia sp. PCC 7116]
Swissprot	tr\|Q69F95\|C85A_PHAVU	0	Cytochrome P450 85A
trEMBL	tr\|V7C397\|V7C397_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW23371.1}

Sequence

Transcript Sequence

>Glyur000390s00023104.1
ATGGCTTTCTTTNTGGCAATTGTTGGTGTATTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTGAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGGTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAAGGTCCAAGCTTCATGAAAAACCAAAGAGCAAGGTATGGCAGTTTTTTCAAATCACACATACTTGGCTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAAGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAACATTGCTGCTGTTCATGGCNCCACTCACAAGTACATGAGAGCAGCACTTCTTTCCATCATTAGCCCCACCATGGTNAGAGATCAGCTTTTACCAAAAGTTGATGAGTTCATGAGATCCTTCCTAAGCAACTGGGATAACAAAGTCATCAACATTCAAGAGAAAGCTAATGAGATGGCCTTCCTCGCATCTCTGAAGCAGATTGCTGGTATAGAGTCCGGCTCAGTATCTAACTCATTCATGACAGAGTTTTTTAAGCTGGTTTTAGGAACATTTTCTCTCCCTATTGACCTTCCCGGGACAAATTACCGCCGCGGAATCCAGGCAAGGAAGAATATAATCAGCATTCTGACTCAGCTACTAGAGGAAAGGAGAGCATCCAATGAAACCTACCAAGATATGCTTGGNTGCTTGATGGCAAGGGATGAAAGAGGACACAAACTAAGTGATGAAGAGATCATTGATCAAGTGATTACAATTATTAATTCTGGTTATGAAACTTTTTCAACAACTTCAATGATGGCAAATGAGCATTTTGCTATAAGGGAGAGGAAAANGCCAAATGAACCACTTGATTGCAATGATATCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACAAATAGATTGGCCGCAATAGTTAATGGGGTTCTAAGGAAAACCACTCAAGACATGGAACTAAATGGCTATTTGATTCCCAAAGGGTGGAGAATATATGTGTATACAAGGGAGATAAATTATGACCCATTTCTGTATCCTGATCCANTAACATTCAACCCATGGAGATGGCTGGATAAGAGGCTAGAGACACATAACTACTTCTTGTTGTTTGGAGGAGGCACCAGATTGTGTCCAGGAAAAGAGTTGGGAATAAAAGAAATCTCAACATTCTTACACTACTTTGTAACCAGATACAGGTGGGAAGTAGTAGGAGGAGATAAAGTAATGAAATTTCCTAGAGTTCGGGCACCAAATGGACTGCACATAAGAGTGTCATCTTACTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00390	72661	76652	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP85A2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K12640	CYP85A2, BR6OX2	EC:1.14.-.-	Brassinosteroid biosynthesis	map00905

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000390s00023104.1	PF00067.17	p450	34	432	9.50E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.294
SRR1783600	control	0.247
SRR1783602	moderate drought stress	0.423
SRR1811619	moderate drought stress	0.360

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.711
DRR006524	Root Summer glycyrrhizin low producing strain	0.640
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.551
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.427

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	11.620
SRR2868004	Drought Stress(Tissue:root)	6.248
SRR2967015	Control (Tissue:root)	7.150

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.091
SRR9715740	Leave	0.323
SRR9715741	Leave	0.567
SRR9715739	Root	0.368
SRR9715742	Root	0.732
SRR9715743	Root	0.168

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	7.759
SRR8400027	Control-Root	7.756