Gene detail information of Glyur000391s00016057.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51140.1 | 8.00E-19 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KHN29208.1 | 3.68E-161 | Transcription factor bHLH130 [Glycine soja] |
| Swissprot | tr|Q9C690|BH122_ARATH | 4.00E-20 | Transcription factor bHLH122 |
| trEMBL | tr|I1KTK8|I1KTK8_SOYBN | 5.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G16190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00391 | 75981 | 79166 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000391s00016057.1 | PF00010.21 | HLH | 323 | 364 | 2.20E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.581 |
| SRR1783600 | control | 1.600 |
| SRR1783602 | moderate drought stress | 2.457 |
| SRR1811619 | moderate drought stress | 2.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.856 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.503 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.608 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.962 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.954 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.107 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.566 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 26.967 |
| SRR2868004 | Drought Stress(Tissue:root) | 40.968 |
| SRR2967015 | Control (Tissue:root) | 65.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.239 |
| SRR9715740 | Leave | 23.099 |
| SRR9715741 | Leave | 25.215 |
| SRR9715739 | Root | 0.160 |
| SRR9715742 | Root | 3.973 |
| SRR9715743 | Root | 2.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.943 |
| SRR8749028 | MeJA induced 9h | 62.409 |
| SRR8749029 | MeJA induced 9h | 15.490 |
| SRR8749030 | Uninduced | 25.471 |
| SRR8749031 | Uninduced | 21.516 |
| SRR8749032 | Uninduced | 13.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 32.684 |
| SRR8400027 | Control-Root | 20.372 |