Gene detail

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Gene detail information of Glyur000392s00023193.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G58430.1	1.00E-21	GDSL-like Lipase/Acylhydrolase family protein
NR	XP_003599652.1	1.06E-65	WRKY transcription factor [Medicago truncatula]
Swissprot	tr\|Q9C648\|GDL23_ARATH	7.00E-24	GDSL esterase/lipase At1g58430 (Precursor)
trEMBL	tr\|G7IXC7\|G7IXC7_MEDTR	4.00E-66	WRKY family transcription factor {ECO:0000313\|EMBL:AES98893.1}

Sequence

Transcript Sequence

>Glyur000392s00023193.1
ATGAAGATCAATTTGATGCTGTCTATTGTTGCAGCCATCATATGTTATTCTCTTATGGTTCTTCGTTCCAAATTGGATTCTCAACTAGAGACTGGAACTCTGAGAATGGAAGACCATGTAGCTGTGGAAATTGATGCTGCAGAAGAAGGAGAAAGAGGAGCTGATGATGACAACAGAAGTGATTCCCAATCTGGTTATTATAGTCATAGGCACCAACAAAATCAGTTTTTGAGAAGAAGGGTGTATAATGATATTGATGGGTATAAATGGAAAAAATATGAAGAGAAACAAGTGAGAAGAAGTGGAAATCAGAGAATCTACTATAAATGCACGAAATCCAATTGTCCTGTGAGGAAAAAAGTTGAGAGAACTATGGATGGGAAAGTTATTGAGACACTCTACAAGGGTACCCATAACCATTGCAAGCCTATGGTTACAATGGAGAGGAGCTCATCATCTGAATATCTTTATTCACTTCTACCACCTTCAGAGACTGCCCCTATTGATGACATGCCAGCTCAACTTCAATCATTTGCCTCCCATGATGGCAGTGAACAATTGGATTATGATGCAGCACCTGAAAGCTCTTCTGTATCAGGAGGGCCTGATGCAGAAGCTCCAAGCTCCAACCAAGTTGGAGCTTCTAGGTGGATGTGCGGCTGTAATGGTCCTACTGCCGAACTATACGACCTTGGATGCAGAAAATTTGCTGTCACTGGGCTTCCTTCCATTGGTTGCATCCCGCTTCAAATAACAGCCAAGTTTGCAAGTTTAAAGGATCGGAAATGTGCAGAGGATGAGAACTTAGATGCCAAGCTTTACAACCGAAAATTGGCACGGCGATTACTTCAAACACAGGCAATGCTTCCGGGAAGCAGAGTTGTTTATACAGAGATATATGACCCCTTGATCGGCCTCATCAATCAACCTGAAAAATATGAGGATGAGAACTTAGATGCCAAGCTTTACAACCGAAAATTGGCACGGCGATTACTTCAAACACAGGCAATGCTTCCGGGAAGCAGAGTTGTTTATACAGAGATATATGACCCCTTGATCGGCCTCATCAATCAACCTGAAAAATATGTTTCTTCCAATTTAACTAGTGGTCTTGGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00392	43248	47114	+

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000392s00023193.1	PF03106.10	WRKY	86	141	3.30E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.054
SRR1783600	control	0.111
SRR1783602	moderate drought stress	0.213
SRR1811619	moderate drought stress	0.204

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.325
DRR006520	Root Summer glycyrrhizin high producing strain	1.885
DRR006521	Root Winter glycyrrhizin high producing strain	0.198
DRR006522	Root Winter glycyrrhizin high producing strain	0.369
DRR006523	Root Summer glycyrrhizin low producing strain	2.552
DRR006524	Root Summer glycyrrhizin low producing strain	2.629
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.914
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.880

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.258
SRR2868004	Drought Stress(Tissue:root)	1.166
SRR2967015	Control (Tissue:root)	1.585

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.282
SRR9715740	Leave	0.022
SRR9715741	Leave	1.336
SRR9715739	Root	0.089
SRR9715742	Root	0.544
SRR9715743	Root	0.453

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.011
SRR8749028	MeJA induced 9h	0.402
SRR8749029	MeJA induced 9h	0.500
SRR8749030	Uninduced	0.870
SRR8749031	Uninduced	0.741
SRR8749032	Uninduced	0.786

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.188
SRR8400027	Control-Root	0.245