Gene detail information of Glyur000392s00023197.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38470.16.00E-79WRKY DNA-binding protein 33
NRXP_007142084.10hypothetical protein PHAVU_008G251300g [Phaseolus vulgaris]
Swissprottr|Q8S8P5|WRK33_ARATH6.00E-100Probable WRKY transcription factor 33
trEMBLtr|V7BB42|V7BB42_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14078.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003927548178507-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000392s00023197.1PF03106.10WRKY971541.10E-30
Glyur000392s00023197.1PF03106.10WRKY2673124.40E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.732
SRR1783600control6.934
SRR1783602moderate drought stress8.159
SRR1811619moderate drought stress8.455

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.843
DRR006520Root Summer glycyrrhizin high producing strain60.205
DRR006521Root Winter glycyrrhizin high producing strain11.140
DRR006522Root Winter glycyrrhizin high producing strain10.593
DRR006523Root Summer glycyrrhizin low producing strain158.005
DRR006524Root Summer glycyrrhizin low producing strain157.036
DRR006525Leaf Summer glycyrrhizin high producing strain141.499
DRR006526Leaf Summer glycyrrhizin high producing strain137.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.669
SRR2868004Drought Stress(Tissue:root)130.529
SRR2967015Control (Tissue:root)144.648

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave413.195
SRR9715740Leave452.823
SRR9715741Leave601.682
SRR9715739Root66.490
SRR9715742Root303.860
SRR9715743Root258.951

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h458.309
SRR8749028MeJA induced 9h479.155
SRR8749029MeJA induced 9h524.698
SRR8749030Uninduced723.062
SRR8749031Uninduced664.847
SRR8749032Uninduced456.944

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.352
SRR8400027Control-Root95.353

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved