Gene detail information of Glyur000396s00032773.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54500.1 | 4.00E-65 | flavodoxin-like quinone reductase 1 |
| NR | KHN28607.1 | 3.51E-92 | Flavoprotein wrbA [Glycine soja] |
| COG | YP_008158631.1 | 3.00E-35 | NAD(P)H:quinone oxidoreductase [Serratia plymuthica S13] |
| Swissprot | tr|Q9LSQ5|FQR1_ARATH | 1.00E-81 | NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305} |
| trEMBL | tr|I1LSS9|I1LSS9_SOYBN | 2.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G17680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00396 | 74561 | 76100 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03809 | wrbA | EC:1.6.5.2 | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.152 |
| SRR1783600 | control | 0.079 |
| SRR1783602 | moderate drought stress | 0.245 |
| SRR1811619 | moderate drought stress | 0.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.984 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 47.486 |
| SRR2868004 | Drought Stress(Tissue:root) | 295.188 |
| SRR2967015 | Control (Tissue:root) | 80.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.267 |
| SRR9715740 | Leave | 1.462 |
| SRR9715741 | Leave | 11.641 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.254 |
| SRR9715743 | Root | 0.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.942 |
| SRR8749028 | MeJA induced 9h | 8.030 |
| SRR8749029 | MeJA induced 9h | 11.585 |
| SRR8749030 | Uninduced | 118.656 |
| SRR8749031 | Uninduced | 321.295 |
| SRR8749032 | Uninduced | 66.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.054 |
| SRR8400027 | Control-Root | 6.383 |