Gene detail

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Gene detail information of Glyur000397s00020480.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G17820.1	4.00E-50	Peroxidase superfamily protein
NR	XP_004489789.1	8.59E-170	PREDICTED: peroxidase 1-like [Cicer arietinum]
Swissprot	tr\|Q43729\|PER57_ARATH	4.00E-66	Peroxidase 57 (Precursor)
trEMBL	tr\|G7JZ11\|G7JZ11_MEDTR	4.00E-161	Peroxidase family protein {ECO:0000313\|EMBL:AES96121.1}

Sequence

Transcript Sequence

>Glyur000397s00020480.1
ATGGCACATCAGAACAATAATATCCTCTTCACGATCCTTTTCCTGTTCCACTTGTTCTTTGTTCCTTCTTTTTCAAGAGCCTTTTCACTCGGTGGCAGTGATGGCTTTAGACTTGAGAATTTAAGGAACAGGGTTAATGACGAATCATTTGATCCGTTTCTATCTCAAGATGATGTTGAAAAACCGGAACAGGGTGGGGAAGCAGAAGCAGGGGAACCTAAGAAGCCTACAGGTGGAAAGGCACAGAATAATAACAATAATAATAATAATGTGGATCCGAATCTGAAGGAAGGGTTCTATAAAAAAAGTTGCCCGAAAGCAGAAGAGATCGTGGCCAAAGCGCTTGCCGACCTCNTTAATGAGAATCCAAACGCAGGCGCCAACATCCTTCGTCTTCAATTCCATGACTGCTTCGTCGGATGCGACGCATCGATCTTNCTAGATTATGCCCAAGCCGGTGAGAAAGTAGAGAAGAGTTCCATGTTCAACGGGCAACTCCTGAAAGGCGCAGACTACATCGATGACATCAAGGCAAAGCTGGAGGAAGAGTGTCCCGGAAAAGTGTCATGTTCCGACGTGCTGTCCTTCGCGGCCAACGAGGCCATGGCGCTAGCCGGTTTGCCACGGAGGGCCCCACTCGGCGGTCGCAGGGACGCCCTGTTGTCCCTCGCATCCATCGCCGAAGACAACAACCTCCCTCTCCCCAACTGGAACATCGACCAGATGATAGCCCTGTTCAACAGGAAAGGCTTCACCACCGAGGAAATGGTGGTCATGCTCGGTGCACACTCGATTGGCACGGCACATTGTGAGATCTTCATGGAGAGGGTCTACAACTTCGAGAAAACCAGGAAACCCGACCCTACCTACCCTCAGCCAGTGGTTGATGAGTTAAAACAGGCATGTGCCAACCCTGGGACTCCCCTGTTCAGGAACCCGCCCGTGAACTTTGATGAGACCCCGACCAAGCTGGACAACCTCTTCTTCAAAAACATGGTGGAGAGGAACAAGACCTTGCTCATAACGGACTCGCACCTGATCAATGACCCCAGGACTCTCCCCACCGTGCGAAGGTTGGCAACTGAGCCTGGCTTGTTCGAGAAATGGTTCCCTGATATGATGGTTAGGATGGGCGCTATGAACGTGCTCACAGGTGAACAAGGGGAGGTGCGGAAGACTTGTAGGTCCACTAATTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00397	138179	139667	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000397s00020480.1	PF00141.18	peroxidase	112	361	1.50E-57

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.030
SRR1783600	control	0.031
SRR1783602	moderate drought stress	0.222
SRR1811619	moderate drought stress	0.222

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.452
DRR006520	Root Summer glycyrrhizin high producing strain	0.404
DRR006521	Root Winter glycyrrhizin high producing strain	0.012
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.457
DRR006524	Root Summer glycyrrhizin low producing strain	1.376
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.078
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.077

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.777
SRR2868004	Drought Stress(Tissue:root)	2.158
SRR2967015	Control (Tissue:root)	1.038

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.109
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.103
SRR9715743	Root	0.037

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.056
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.118
SRR8749031	Uninduced	0.419
SRR8749032	Uninduced	0.308

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.125
SRR8400027	Control-Root	0.109